Sanibel-Captiva Conservation Foundation
Technical Github Webpage

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Site Update 2023-02-24

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Reporting

Data

SCCF

• SCCF River, Estuary and Coastal Observing Network (RECON)|Link|

Other Agencies

• SFWMD DBHYDRO|Link|

• USGS National Water Information System|Link|

• USACE Daily Conditions Reports|Link|

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Conditions

• LORS08 Decision Trees (Part C and D) | Link |

• SCCF Page - Caloosahatchee Conditions Reports | Link |

• Weekly Caloosahatchee Stakeholder Report | Report | Source | Depreciated

• Caloosahatchee/Okeechobee Conditions Report | Report | Source | Depreciated

• Okeechobee and Caloosahatchee Regional Conditions Report | Report | Source |

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Trends

• South-west Florida WQ Trends Coming Soon

• Lake Okeechobee WQ Trends Coming Soon

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Other Reports

• Caloosahatchee River Estuary Water Quality Tracking | Report | Source |

• Lake Okeechobee WQ Evaluation | Report | Source |

Respositories

• github.com/sccf-tech: Github organization

• sccf-tech.github.io: files for this Github website

• LOSOM Estuary Nutrient Loading Model Repository | Link |

• Lake Okeechobee RECOVER PM R-Package| Link | Webpage |

Presentations/Tech Report

LOSOM

• USACE project webpage https://www.saj.usace.army.mil/LOSOM/
• Related work:
• DRAFT - Estuary Nutrient Loading Model (Caloosahatchee Estuary) | Link | Source | Addendum Presentation |
• DRAFT - Estuary Nutrient Loading Model (St Lucie Estuary) | Link | Source |

• Iteration 1 modeling:

• DRAFT - Estuary Nutrient Loading Model results | Link | Source |

  ## Warning: package 'downloadthis' was built under R version 4.1.3

  Download CRE ENLM results Download SLE ENLM results
  
• DRAFT - Iteration 1 Modeling Evaluation | Link | Source |
• Iternation 1 Modeling Evaluation Interactive tool | Link |
• Pareto Re-evalution | Link |
• Iteration 2 Framework Evaluation | Link |

• Iteration 2 modeling:
• DRAFT - Modeling Evaluation | Link |
• Evaluation Technical Workshop (2021-06-22) | Link | PDF|
• Evaluation Technical Workshop - Climate Consideration (2021-06-30) | Link | PDF |
• Lake & Estuary Summary | Link |
• Estuary Nutrient Loading Model results | Link | PDF |
Download CRE ENLM results Download SLE ENLM results

• S77/S308 Nutrient Loading estimates | Link | PDF |
• Evaluation with SR3.5 | Link | PDF |
• Estuary Summary | Link | PDF |
• Post Iteration 2 Eval | Link | PDF |
• Post Iteration 2 Eval - Everglades Foundation Optimization | Link | PDF |
• Post Iteration 2 Eval - Briefing | Link | PDF |

• Sept 2021 - LOSOM Update (Captiva Comunity Panel & Collier County Board of Commissioners) | PDF |

• Iteration 3 modeling:
• Phase 1 - Initial Sensitivity Runs |
• Initial Evaluation - bulk data analysis | Link | PDF |
• Independent Analysis - using raw outputs | Link | PDF |
• Slidedeck for discussion with FDEP | Link | PDF |
• Phase 2 - Batch Optimization |
• Batch Optimization - model screening | Link | PDF |
• Batch Optimization - Selected Alternative | Link | PDF |
• Phase 3 - Preferred Alternative |
• Preferred Alternative | Link | PDF |
• Listening Session | Link | PDF |
• Presentation to UF CCS | Link |

PSRP

• GSSHA Model
• Modeling to support Southwestern Protection Feature | Link |

FDEP Triennial Review

• 2021 Proposed DO SSAC Technical Review | Report | Source |
• FDEP DRAFT DO SSAC Development Document | Report | FDEP Webpage |

SCCF Board

• Dec 2021 | slides |

Open Science

• TBEP Open Science Subcommittee - 01 Feb 2022 | slides | pdf |

Resources

• TBEP technical github

• FDEP OWPER technical github

Resources from TBEP page

R Lessons & Tutorials

• Software Carpentry: R for Reproducible Scientific Analysis
• Data Carpentry: Geospatial Workshop
• Data Carpentry: R for Data Analysis and Visualization of Ecological Data
• Data Carpentry: Data Organization in Spreadsheets
• RStudio Webinars, many topics
• R For Cats: Basic introduction site, with cats!
• Topical cheatsheets from RStudio, also viewed from the help menu
• Cheatsheet from CRAN of base R functions
• Totally awesome R-related artwork by Allison Horst
• Color reference PDF with text names, Color cheatsheet PDF from NCEAS

R eBooks/Courses

• Jenny Bryan’s Stat545.com
• Garrett Grolemund and Hadley Wickham’s R For Data Science
• Chester Ismay and Albert Y. Kim’s Modern DiveR
• Julia Silge and David Robinson Text Mining with R
• Hadley Wickham’s Advanced R
• Hadley Wickham’s R for Data Science
• Yihui Xie R Markdown: The Definitive Guide
• Winston Chang R Graphics Cookbook
• Wegman et al. Remote Sensing and GIS for Ecologists: Using Open Source Software
• Lovelace et al. Geocomputation with R
• Edszer Pebesma and Roger Bivand Spatial Data Science

Git/Github

• Jenny Bryan’s Happy Git and Github for the useR
• Coding Club Intro to Github

 

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Site content curated by SCCF and partners

Site Build 2021-03-26